Benchmarking transcript expression quantification
نویسندگان
چکیده
منابع مشابه
Accurate, fast, and model-aware transcript expression quantification with Salmon
Existing methods for quantifying transcript abundance require a fundamental compromise: either use high quality read alignments and experiment-specific models or sacrifice them for speed. We introduce Salmon, a quantification method that overcomes this restriction by combining a novel ‘lightweight’ alignment procedure with a streaming parallel inference algorithm and a feature-rich bias model. ...
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ژورنال
عنوان ژورنال: Nature Reviews Genetics
سال: 2016
ISSN: 1471-0056,1471-0064
DOI: 10.1038/nrg.2016.62